PC12 Model DataFiles

Supplementary Material for PC12 paper

• ``The Statistical Mechanics of Meta-Models: Nerve Growth Factor Signaling'', Kevin S. Brown, Colin C. Hill, Guillermo A. Calero, Kelvin H. Lee, James P. Sethna, and Richard A. Cerione, (draft pdf),
• Best fit parameters, with key to names
• Default initial chemical amounts, with key to names
• Hessian at best fit parameter values
• Sensitivity of residuals to parameters dr/dp at best fit parameter values
• Ensemble of parameters
• Singular values and singular vectors of the ensemble.

Time Series Data

• BRafLandrethNGF.dat
• Erk1HYaoEGF.dat
• Erk1HYaoNGF.dat
• ErkMekTraverse2EGF.dat
• ErkMekTraverse2NGF.dat
• ErkMekTraverseHERover.dat
• Raf1LandrethEGF.dat
• Raf1LandrethNGF.dat
• Rap1YorkNGF.dat
• RasGreen1EGF.dat
• RasGreen1NGF.dat

by Kevin S. Brown, Josh Waterfall, and James P. Sethna

Statistical Mechanics: Entropy, Order Parameters, and Complexity, now available at Oxford University Press (USA, Europe).