TranscriptionReaction.h Source File

00001 // TranscriptionReaction.h: interface for the TranscriptionReaction class.
00002 //
00004 
00005 #if !defined(AFX_TRANSCRIPTIONREACTION_H__FF374BEC_DD7B_11D3_8099_00A0C9B3BB18__INCLUDED_)
00006 #define AFX_TRANSCRIPTIONREACTION_H__FF374BEC_DD7B_11D3_8099_00A0C9B3BB18__INCLUDED_
00007 
00008 #if _MSC_VER > 1000
00009 #pragma once
00010 #endif // _MSC_VER > 1000
00011 
00012 #include "Reaction.h"
00013 using namespace std;
00014 
00015 class TranscriptionReaction : public Reaction   
00016 {
00017 public:
00018         double GetRate() const;
00019         TranscriptionReaction(Chemical *freePromoter, Chemical *mRNA, RateConstant *ktm, std::string reactionName);
00020         virtual ~TranscriptionReaction();
00021         std::vector<JElement *> *GetChemicalJacobian();
00022         void SetTeXForm();
00023 private:
00024         int freePromoter, mRNA; // Local integer variables denoting place of various chemicals on the local chemical list
00025         int ktm;                // Local integer variables denoting place of various rate constants on the local rate constant list
00026 
00027 };
00028 
00029 #endif // !defined(AFX_TRANSCRIPTIONREACTION_H__FF374BEC_DD7B_11D3_8099_00A0C9B3BB18__INCLUDED_)
00030 
00031 
00032