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Class Hierarchy

Go to the graphical class hierarchy

This inheritance list is sorted roughly, but not completely, alphabetically:

CAcceptanceRatioFreeEnergyEstimator
CBinaryNetworkDataRelation
CCell
CComponents
CConversionFactor
CDisplay
CDNA
CEnsembleMember
CEquations
CEvolutionStrategyChromosome
CEvolutionStrategyChromosome::CEvolutionStrategyChromosomeComparator
CForceVectorPoint
CForceVectorPoint::CForceVectorPointComparator
CForcingData
CGeometry
Chemical
- CAlgebraicChemical
CIntegration
CLowDimensionalCostFunctionMapper
CMatrixOperations
CParameterFilter
- CIdentityParameterFilter
- CLogParameterFilter
- CSquareRootParameterFilter
CParameterRandomizer
CParameterTranslator
- CPC12ParameterTranslator
CXYPoint
CXYPoint::CXComparator
CXYPoint::CYComparator
CXYVector
DataPoint
- ChemicalTimeSeriesData
DataPoint::DataPointComparator
Experiment
GeneticCode
LocateInputFileDirectory
Minimizable
- CSloppyDataMinimizableDirector
  - CCombinatorialNetworksSloppyMinimizableDirector
- NLLSMinimizable
Observer
- CConjugateGradientObserver
- CellAverageObserver
- CForcesObserver
- CLeastSquaresObserver
- ConcentrationObserver
- GnuPlotter
ParameterReader
Rand
RateConstant
Reaction
- CatalyzedTranslationReaction
- CChemicalSink
- CChemicalSource
- CConstantSinkReaction
- CConstantSourceReaction
- CFirstOrderDestructionReaction
- CMichaelisMentenHeterodimerizationReaction
- CNormalizedLinearAmplifier
- CNormalizedLinearAttenuator
- CompetitiveDegradationReaction
- CPoolTransitionReaction
- CTauReaction
- CTrimerDissociation
- CTrimerFormation
- GenerationReaction
  - ProteinTranslationReaction
  - TranscriptionInducedByBindingReaction
  - TranscriptionInhibitedByBindingReaction
- HeterodimerDissociationReaction
  - PromoterUnbindingReaction
  - ReceptorUnbindingReaction
- HeterodimerizationReaction
  - PromoterBindingReaction
  - ReceptorBindingReaction
- HomodimerDissociationReaction
- HomodimerizationReaction
- MichaelisMentenReaction
  - MichaelisMentenDephosphorylationReaction
  - MichaelisMentenGProteinActivationReaction
  - MichaelisMentenGProteinDeactivationReaction
  - MichaelisMentenPhosphorylationReaction
  - MichaelisMentenProteinProteinActivationReaction
  - MichaelisMentenProteinProteinDeactivationReaction
  - MichaelisMentenTransformationReaction
- PlasmidReplicationReaction
- TranscriptionReaction
- TransformationReaction
  - ChemicalTransportReaction
- UnaryDegradationReaction
  - RNADegradationReaction
  - UnstableProteinDegradationReaction
Reaction::JElement
ReactionNetwork
- CAlternateErkSubnetwork
- CAlternateOneGeneInhibitoryNetwork
- CCombinatorialNetwork
- CEGFRTraffickingNetwork
- CEGFRTraffickingPredictionNetwork
- CExampleNetwork
- CForestNitrogenCycleNetwork
- CLaubLoomisDictyNetwork
- CMartielGoldbeterDictyNetwork
- CMixedReactionNetwork
- CPC12RapMinusNetwork
- CQuorumSensingNetwork
- CTauNetwork
- ErkSubnetwork
- OneGeneInhibitoryNetwork
- SmallErkSubnetwork
RowColumnSparseMatrix::MatrixElement
RowColumnSparseMatrix::MatrixElement::MatrixElementComparator
SparseMatrix
- RowColumnSparseMatrix
Subject
- CDirector
  - CRunDirector
- CReactionMover
- CRunnable
- CStochasticSensitivityAnalysis
- Minimizer
- NetworkMinimizable
- SingleNetworkMinimizable
TimeVectorPoint
TimeVectorPoint::TimeVectorPointComparator

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