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Runnable.cpp

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// Runnable.cpp: implementation of the CRunnable class.
//

#include "Runnable.h"

// Construction/Destruction

CRunnable::CRunnable()
{

}

CRunnable::~CRunnable()
{

}

void CRunnable::SetRunnableName(std::string name)
{
        m_sRunnableName = name;
}

void CRunnable::SetComponents(ReactionNetwork *pRxnNetwork, CReactionMover *pRxnMover, CellAverageObserver *pCellObserver)
{
        m_pRxnNetwork = pRxnNetwork;
        m_pRxnMover = pRxnMover;
        m_pCellObserver = pCellObserver;
}

void CRunnable::Run()
{
        // zero the observer
        m_pCellObserver->ZeroConcentrations();
        // attach the observer to the mover
        m_pRxnMover->Attach(m_pCellObserver);
        // run the network, averaging over the population
        int nCells = m_pCellObserver->GetNumberOfCells();
        int intTime = m_pCellObserver->GetNumberOfTimeSteps();
        for(int i = 0; i < nCells; i++)
        {
                m_pRxnNetwork->ChemicalReset();
                m_pRxnMover->Move(0.0,0.0,m_pRxnNetwork);
                m_pRxnMover->Move(0.0,(double)(intTime) - 1.0, m_pRxnNetwork);
        }
        // detach the observer
        m_pRxnMover->Detach(m_pCellObserver);
        // notify observers (a la plotters)
        Notify();
}

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