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CatalyzedTranslationReaction Class Reference

#include <CatalyzedTranslationReaction.h>

Inheritance diagram for CatalyzedTranslationReaction:

[legend]Collaboration diagram for CatalyzedTranslationReaction:

[legend]List of all members.

Public Methods
double	GetRate () const
	CatalyzedTranslationReaction (Chemical *mRNA, Chemical *catalyst, Chemical *protein, RateConstant *k_tr, std::string reactionName)
virtual	~CatalyzedTranslationReaction ()
std::vector< JElement * > *	GetChemicalJacobian ()
void	SetTeXForm ()
Protected Attributes
int	k_tr
int	mRNA
int	catalyst
int	protein

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Constructor & Destructor Documentation

CatalyzedTranslationReaction::CatalyzedTranslationReaction (  Chemical *    mRNA, Chemical *    catalyst, Chemical *    protein, RateConstant *    k_tr, std::string    reactionName )

Definition at line 11 of file CatalyzedTranslationReaction.cpp. References Reaction::chemicalJacobian, Reaction::chemicals, Reaction::numberOfEachChemicalChangedByReaction, Reaction::rateConstants, and SetTeXForm.

CatalyzedTranslationReaction::~CatalyzedTranslationReaction (    )  [virtual]

Definition at line 38 of file CatalyzedTranslationReaction.cpp.

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Member Function Documentation

std::vector< Reaction::JElement * > * CatalyzedTranslationReaction::GetChemicalJacobian (    )  [virtual]

Implements Reaction. Definition at line 66 of file CatalyzedTranslationReaction.cpp. References catalyst, Reaction::chemicalJacobian, Reaction::chemicals, k_tr, mRNA, and Reaction::rateConstants.

double CatalyzedTranslationReaction::GetRate (    )  const [virtual]

Implements Reaction. Definition at line 43 of file CatalyzedTranslationReaction.cpp. References catalyst, Reaction::chemicals, k_tr, mRNA, and Reaction::rateConstants.

void CatalyzedTranslationReaction::SetTeXForm (    )  [virtual]

Implements Reaction. Definition at line 48 of file CatalyzedTranslationReaction.cpp. References catalyst, Reaction::chemicals, k_tr, Reaction::m_sTeXForm, mRNA, and Reaction::rateConstants. Referenced by CatalyzedTranslationReaction.

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Member Data Documentation

int CatalyzedTranslationReaction::catalyst [protected]

Definition at line 24 of file CatalyzedTranslationReaction.h. Referenced by GetChemicalJacobian, GetRate, and SetTeXForm.

int CatalyzedTranslationReaction::k_tr [protected]

Definition at line 23 of file CatalyzedTranslationReaction.h. Referenced by GetChemicalJacobian, GetRate, and SetTeXForm.

int CatalyzedTranslationReaction::mRNA [protected]

Definition at line 24 of file CatalyzedTranslationReaction.h. Referenced by GetChemicalJacobian, GetRate, and SetTeXForm.

int CatalyzedTranslationReaction::protein [protected]

Definition at line 24 of file CatalyzedTranslationReaction.h.

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The documentation for this class was generated from the following files:

• CatalyzedTranslationReaction.h
• CatalyzedTranslationReaction.cpp

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