---

EnsembleCombinationDirector.h

Go to the documentation of this file.

// EnsembleCombinationDirector.h: interface for the CEnsembleCombinationDirector class.
//

#if !defined(AFX_ENSEMBLECOMBINATIONDIRECTOR_H__88C5875B_DD03_4339_BBDB_AF090CBA1D96__INCLUDED_)
#define AFX_ENSEMBLECOMBINATIONDIRECTOR_H__88C5875B_DD03_4339_BBDB_AF090CBA1D96__INCLUDED_

#if _MSC_VER > 1000
#pragma once
#endif // _MSC_VER > 1000

#include <iomanip>
#include <iostream>
#include "RunDirector.h"
#include "SingleNetworkMinimizable.h"
#include "GnuPlotterEnsembleRunDirectorObserver.h"
#include "GnuPlotterEnsembleDataDirectorObserver.h"
#include "ParameterReader.h"

// avoid conflicts; both files refer to one another

class GnuPlotterEnsembleRunDirectorObserver; 
class GnuPlotterEnsembleDataDirectorObserver; 

class CEnsembleCombinationDirector : public CRunDirector  
{
public:
        CEnsembleCombinationDirector(int ensembleSize);
        virtual ~CEnsembleCombinationDirector();
        void LoadEnsembleInfo(std::string parameterFile);
        void SumAllocate();
        void Execute();
        void ConvertToStatistics();
        const double **GetNoDataAverages(int index) const {return (const double **)m_vpdNoDataSumC[index];}
        const double **GetNoDataStdDevs(int index) const {return (const double **)m_vpdNoDataSumCSqr[index];}
        const double **GetDataAverages(int index) const {return (const double **)m_vpdDataSumC[index];}
        const double **GetDataStdDevs(int index) const {return (const double **)m_vpdDataSumCSqr[index];}
        // Returns a single mover associated with the networks
        virtual CReactionMover *GetMover(int moverIndex) {return m_vpMovers[moverIndex];}
        // Returns the number of experiments
        virtual int GetNExperiments() const {return m_vpExperiments.size();}
        virtual SingleNetworkMinimizable *GetMinimizable(int minIndex) {return m_vpMinimizables[minIndex];}
private:
        // Initialization of conditions for each minimizable
        virtual void DefineExperiments() = 0;
        // Initialization of conditions for the runnables
        virtual void DefineRuns() = 0;
protected:
        int m_iEnsembleSize;
        std::vector<double *> m_vpdEnsembleParameters;
        // go with runnables
        std::vector<double **> m_vpdNoDataSumC;
        std::vector<double **> m_vpdNoDataSumCSqr;
        // go with minimizables
        std::vector<double **> m_vpdDataSumC;
        std::vector<double **> m_vpdDataSumCSqr;
        std::vector<GnuPlotterEnsembleRunDirectorObserver *> m_vpEnsembleRunPlotters;
        std::vector<GnuPlotterEnsembleDataDirectorObserver *> m_vpEnsembleDataPlotters;
        // organizes the minimizables
        std::vector<SingleNetworkMinimizable *> m_vpMinimizables;
        std::vector<Experiment *> m_vpExperiments;
        std::vector<ReactionNetwork *> m_vpNetworks;
        std::vector<CReactionMover *> m_vpMovers;
};

#endif // !defined(AFX_ENSEMBLECOMBINATIONDIRECTOR_H__88C5875B_DD03_4339_BBDB_AF090CBA1D96__INCLUDED_)

---