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GeneticCode.h File Reference

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Compounds

class  GeneticCode

Enumerations

enum  Codon {
  AAA, AAU, AAG, AAC,
  AUA, AUU, AUG, AUC,
  AGA, AGU, AGG, AGC,
  ACA, ACU, ACG, ACC,
  UAU, UAC, UUA, UUU,
  UUG, UUC, UGU, UGG,
  UGC, UCA, UCU, UCG,
  UCC, GAA, GAU, GAG,
  GAC, GUA, GUU, GUG,
  GUC, GGA, GGU, GGG,
  GGC, GCA, GCU, GCG,
  GCC, CAA, CAU, CAG,
  CAC, CUA, CUU, CUG,
  CUC, CGA, CGU, CGG,
  CGC, CCA, CCU, CCG,
  CCC, UAA, UAG, UGA
}
enum  Anticodon {
  uuu, quu, gau, nau,
  cau, icg, ccg, ucu,
  gga, gcu, ggu, ugu,
  cca, qua, gag, uag,
  cag, aaa, gaa, gca,
  uuc, quc, gac, gcc,
  ucc, ccc, ggc, uug,
  cug, qug, qgg, ugg,
  stop
}


Enumeration Type Documentation

enum Anticodon
 

Enumeration values:
uuu 
quu 
gau 
nau 
cau 
icg 
ccg 
ucu 
gga 
gcu 
ggu 
ugu 
cca 
qua 
gag 
uag 
cag 
aaa 
gaa 
gca 
uuc 
quc 
gac 
gcc 
ucc 
ccc 
ggc 
uug 
cug 
qug 
qgg 
ugg 
stop 

Definition at line 23 of file GeneticCode.h.

Referenced by GeneticCode::get_anticodon, and TranslationModelMinimizable::TranslationModelMinimizable.

enum Codon
 

Enumeration values:
AAA 
AAU 
AAG 
AAC 
AUA 
AUU 
AUG 
AUC 
AGA 
AGU 
AGG 
AGC 
ACA 
ACU 
ACG 
ACC 
UAU 
UAC 
UUA 
UUU 
UUG 
UUC 
UGU 
UGG 
UGC 
UCA 
UCU 
UCG 
UCC 
GAA 
GAU 
GAG 
GAC 
GUA 
GUU 
GUG 
GUC 
GGA 
GGU 
GGG 
GGC 
GCA 
GCU 
GCG 
GCC 
CAA 
CAU 
CAG 
CAC 
CUA 
CUU 
CUG 
CUC 
CGA 
CGU 
CGG 
CGC 
CCA 
CCU 
CCG 
CCC 
UAA 
UAG 
UGA 

Definition at line 5 of file GeneticCode.h.

Referenced by GeneticCode::get_anticodon, GeneticCode::read_seq, TranslationModelMinimizable::TranslationModelMinimizable, and GeneticCode::write_seq.


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