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CMixedReactionNetwork Class Reference

#include <MixedReactionNetwork.h>

Inheritance diagram for CMixedReactionNetwork:

[legend]Collaboration diagram for CMixedReactionNetwork:

[legend]List of all members.

Public Methods
	CMixedReactionNetwork ()
	CMixedReactionNetwork (ReactionNetwork *pReactionNetwork, intVector stocReactionList)
virtual	~CMixedReactionNetwork ()
int	GetNumberOfChemicals () const
int	GetNumberOfReactions () const
int	GetNumberOfRateConstants () const
Chemical *	GetChemical (int chemicalNumber)
RateConstant *	GetRateConstant (int rateConstantNumber)
void	ChemicalReset ()
void	RateConstantReset ()
void	SetAmount (int chemicalNumber, double amount)
vpReaction *	GetReactions ()
Reaction *	GetReaction (int reactionNumber)
vpReaction *	GetStochasticReactions ()
Reaction *	GetStochasticReaction (int reactionNumber)
vpReaction *	GetDeterministicReactions ()
Reaction *	GetDeterministicReaction (int reactionNumber)
vpChemical *	GetChemicals ()
vpRateConstant *	GetRateConstants ()
int	GetNumberOfStochasticReactions () const
int	GetNumberOfDeterministicReactions () const
dblVector *	GetReactionRates ()
dblVector *	GetStochasticReactionRates ()
dblVector *	GetDeterministicReactionRates ()
double	GetTotalStochasticReactionProbability ()
Private Attributes
ReactionNetwork *	m_pReactionNetwork
intVector	m_viStochasticList
vpReaction	m_vpStochasticReactions
vpReaction	m_vpDeterministicReactions
dblVector	m_dStochasticReactionRates
dblVector	m_dDeterministicReactionRates

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Constructor & Destructor Documentation

CMixedReactionNetwork::CMixedReactionNetwork (    )

Definition at line 11 of file MixedReactionNetwork.cpp.

CMixedReactionNetwork::CMixedReactionNetwork (  ReactionNetwork *    pReactionNetwork, intVector    stocReactionList )

Definition at line 16 of file MixedReactionNetwork.cpp. References ReactionNetwork::GetNumberOfReactions, ReactionNetwork::GetReactions, intVector, m_dDeterministicReactionRates, m_dStochasticReactionRates, m_pReactionNetwork, m_viStochasticList, m_vpDeterministicReactions, and m_vpStochasticReactions.

CMixedReactionNetwork::~CMixedReactionNetwork (    )  [virtual]

Definition at line 45 of file MixedReactionNetwork.cpp.

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Member Function Documentation

void CMixedReactionNetwork::ChemicalReset (    )  [virtual]

Reimplemented from ReactionNetwork. Definition at line 77 of file MixedReactionNetwork.cpp. References ReactionNetwork::GetChemical, GetNumberOfChemicals, m_pReactionNetwork, and Chemical::Reset.

Chemical * CMixedReactionNetwork::GetChemical (  int    chemicalNumber )  [virtual]

Reimplemented from ReactionNetwork. Definition at line 67 of file MixedReactionNetwork.cpp. References ReactionNetwork::GetChemical, and m_pReactionNetwork. Referenced by CTauNetwork::GetChemical.

vpChemical * CMixedReactionNetwork::GetChemicals (    )  [virtual]

Reimplemented from ReactionNetwork. Definition at line 128 of file MixedReactionNetwork.cpp. References ReactionNetwork::GetChemicals, m_pReactionNetwork, and vpChemical. Referenced by CTauNetwork::GetChemicals.

Reaction * CMixedReactionNetwork::GetDeterministicReaction (  int    reactionNumber )

Definition at line 123 of file MixedReactionNetwork.cpp. References m_vpDeterministicReactions.

dblVector * CMixedReactionNetwork::GetDeterministicReactionRates (    )

Definition at line 192 of file MixedReactionNetwork.cpp. References dblVector, GetNumberOfDeterministicReactions, m_dDeterministicReactionRates, and m_vpDeterministicReactions.

vpReaction * CMixedReactionNetwork::GetDeterministicReactions (    )

Definition at line 118 of file MixedReactionNetwork.cpp. References m_vpDeterministicReactions, and vpReaction.

int CMixedReactionNetwork::GetNumberOfChemicals (    )  const [virtual]

Reimplemented from ReactionNetwork. Definition at line 50 of file MixedReactionNetwork.cpp. References ReactionNetwork::GetNumberOfChemicals, and m_pReactionNetwork. Referenced by ChemicalReset, CTauNetwork::CTauNetwork, CTauNetwork::GetNumberOfChemicals, and CMixedReactionMover::Move.

int CMixedReactionNetwork::GetNumberOfDeterministicReactions (    )  const

Definition at line 143 of file MixedReactionNetwork.cpp. References m_vpDeterministicReactions. Referenced by GetDeterministicReactionRates.

int CMixedReactionNetwork::GetNumberOfRateConstants (    )  const [virtual]

Reimplemented from ReactionNetwork. Definition at line 62 of file MixedReactionNetwork.cpp. References ReactionNetwork::GetNumberOfRateConstants, and m_pReactionNetwork. Referenced by RateConstantReset.

int CMixedReactionNetwork::GetNumberOfReactions (    )  const [virtual]

Reimplemented from ReactionNetwork. Definition at line 57 of file MixedReactionNetwork.cpp. References ReactionNetwork::GetNumberOfReactions, and m_pReactionNetwork. Referenced by CTauNetwork::GetNumberOfReactions, and CMixedReactionMover::Move.

int CMixedReactionNetwork::GetNumberOfStochasticReactions (    )  const

Definition at line 138 of file MixedReactionNetwork.cpp. References m_vpStochasticReactions. Referenced by CMixedReactionMover::DoStochasticMove, GetStochasticReactionRates, and GetTotalStochasticReactionProbability.

RateConstant * CMixedReactionNetwork::GetRateConstant (  int    rateConstantNumber )  [virtual]

Reimplemented from ReactionNetwork. Definition at line 72 of file MixedReactionNetwork.cpp. References ReactionNetwork::GetRateConstant, and m_pReactionNetwork.

vpRateConstant * CMixedReactionNetwork::GetRateConstants (    )  [virtual]

Reimplemented from ReactionNetwork. Definition at line 133 of file MixedReactionNetwork.cpp. References ReactionNetwork::GetRateConstants, m_pReactionNetwork, and vpRateConstant.

Reaction * CMixedReactionNetwork::GetReaction (  int    reactionNumber )  [virtual]

Reimplemented from ReactionNetwork. Definition at line 103 of file MixedReactionNetwork.cpp. References ReactionNetwork::GetReaction, and m_pReactionNetwork. Referenced by CMixedReactionMover::Move.

dblVector * CMixedReactionNetwork::GetReactionRates (    )  [virtual]

Reimplemented from ReactionNetwork. Definition at line 148 of file MixedReactionNetwork.cpp. References dblVector, ReactionNetwork::GetNumberOfReactions, Reaction::GetRate, ReactionNetwork::GetReaction, m_pReactionNetwork, m_viStochasticList, and ReactionNetwork::reactionRates. Referenced by CTauNetwork::GetReactionRates.

vpReaction * CMixedReactionNetwork::GetReactions (    )  [virtual]

Reimplemented from ReactionNetwork. Definition at line 98 of file MixedReactionNetwork.cpp. References ReactionNetwork::GetReactions, m_pReactionNetwork, and vpReaction. Referenced by CTauNetwork::GetReactions.

Reaction * CMixedReactionNetwork::GetStochasticReaction (  int    reactionNumber )

Definition at line 113 of file MixedReactionNetwork.cpp. References m_vpStochasticReactions. Referenced by CMixedReactionMover::DoStochasticMove, and GetTotalStochasticReactionProbability.

dblVector * CMixedReactionNetwork::GetStochasticReactionRates (    )

Definition at line 181 of file MixedReactionNetwork.cpp. References dblVector, GetNumberOfStochasticReactions, m_dStochasticReactionRates, and m_vpStochasticReactions. Referenced by CMixedReactionMover::DoStochasticMove.

vpReaction * CMixedReactionNetwork::GetStochasticReactions (    )

Definition at line 108 of file MixedReactionNetwork.cpp. References m_vpStochasticReactions, and vpReaction.

double CMixedReactionNetwork::GetTotalStochasticReactionProbability (    )

Definition at line 203 of file MixedReactionNetwork.cpp. References GetNumberOfStochasticReactions, Reaction::GetRate, and GetStochasticReaction. Referenced by CTauNetwork::GetReactionRates, and CMixedReactionMover::Move.

void CMixedReactionNetwork::RateConstantReset (    )  [virtual]

Reimplemented from ReactionNetwork. Definition at line 85 of file MixedReactionNetwork.cpp. References GetNumberOfRateConstants, ReactionNetwork::GetRateConstant, m_pReactionNetwork, and RateConstant::Reset.

void CMixedReactionNetwork::SetAmount (  int    chemicalNumber, double    amount )  [virtual]

Reimplemented from ReactionNetwork. Definition at line 93 of file MixedReactionNetwork.cpp. References ReactionNetwork::GetChemical, m_pReactionNetwork, and Chemical::SetAmount.

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Member Data Documentation

dblVector CMixedReactionNetwork::m_dDeterministicReactionRates [private]

Definition at line 50 of file MixedReactionNetwork.h. Referenced by CMixedReactionNetwork, and GetDeterministicReactionRates.

dblVector CMixedReactionNetwork::m_dStochasticReactionRates [private]

Definition at line 49 of file MixedReactionNetwork.h. Referenced by CMixedReactionNetwork, and GetStochasticReactionRates.

ReactionNetwork* CMixedReactionNetwork::m_pReactionNetwork [private]

Definition at line 45 of file MixedReactionNetwork.h. Referenced by ChemicalReset, CMixedReactionNetwork, GetChemical, GetChemicals, GetNumberOfChemicals, GetNumberOfRateConstants, GetNumberOfReactions, GetRateConstant, GetRateConstants, GetReaction, GetReactionRates, GetReactions, RateConstantReset, and SetAmount.

intVector CMixedReactionNetwork::m_viStochasticList [private]

Definition at line 46 of file MixedReactionNetwork.h. Referenced by CMixedReactionNetwork, and GetReactionRates.

vpReaction CMixedReactionNetwork::m_vpDeterministicReactions [private]

Definition at line 48 of file MixedReactionNetwork.h. Referenced by CMixedReactionNetwork, GetDeterministicReaction, GetDeterministicReactionRates, GetDeterministicReactions, and GetNumberOfDeterministicReactions.

vpReaction CMixedReactionNetwork::m_vpStochasticReactions [private]

Definition at line 47 of file MixedReactionNetwork.h. Referenced by CMixedReactionNetwork, GetNumberOfStochasticReactions, GetStochasticReaction, GetStochasticReactionRates, and GetStochasticReactions.

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The documentation for this class was generated from the following files:

• MixedReactionNetwork.h
• MixedReactionNetwork.cpp

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