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CComponents Class Reference

#include <Components.h>

Collaboration diagram for CComponents:

[legend]List of all members.

Public Methods
void	NextY ()
void	Divide ()
void	ResetY (int i)
double	GetDY9 ()
double	GetDY8S ()
double	GetDY6S ()
void	FirstInt ()
double	GetY (int i)
void	StartAverages ()
void	Initialize ()
void	Integrate ()
	CComponents (const CComponents &rComp, CCell *pCell)
	CComponents (CCell *pCell)
virtual	~CComponents ()
CComponents &	operator= (const CComponents &rhs)
	CComponents (const CComponents &rComp)
Public Attributes
int	test
double	DT
double	DEV
Private Methods
void	Flux (double *Y, double *DY)
void	CheckNegConc ()
void	TruncatedError ()
void	DecideStepSize ()
void	PredictorCorrector ()
	CComponents ()
Private Attributes
int	ITN
int	NT2
CCell *	m_pCell
int	NDimensions
double	InitialValues [NBIOVARS]
double	Averages [NBIOVARS]
double	KR [27]
double	Y0 [NBIOVARS]
double	Y1 [NBIOVARS]
double	Y2 [NBIOVARS]
double	Y2EST [NBIOVARS]
double	E3Rate
double	TotalTime
double	Y [NBIOVARS]
double	DY6S
double	DY8S
double	DY9
double	CA1
double	CA2
double	CA3

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Constructor & Destructor Documentation

CComponents::CComponents (  const CComponents &    rComp, CCell *    pCell )

Definition at line 49 of file Components.cpp. References m_pCell, and test.

CComponents::CComponents (  CCell *    pCell )

Definition at line 18 of file Components.cpp. References Initialize, and m_pCell.

CComponents::~CComponents (    )  [virtual]

Definition at line 31 of file Components.cpp.

CComponents::CComponents (  const CComponents &    rComp )

Definition at line 41 of file Components.cpp. References NBIOVARS.

CComponents::CComponents (    )  [private]

Definition at line 25 of file Components.cpp.

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Member Function Documentation

void CComponents::CheckNegConc (    )  [private]

Definition at line 223 of file Components.cpp. References CDisplay::ErrorMessage, CCell::GetDisplay, m_pCell, NBIOVARS, and Y. Referenced by Integrate.

void CComponents::DecideStepSize (    )  [private]

Definition at line 195 of file Components.cpp. References DT, ITN, and NT2. Referenced by Integrate.

void CComponents::Divide (    )

Definition at line 455 of file Components.cpp. References NBIOVARS, Y, and Y0. Referenced by CCell::Division.

void CComponents::FirstInt (    )

Definition at line 144 of file Components.cpp. References DT, Flux, NBIOVARS, NT2, Y0, and Y1. Referenced by Integrate.

void CComponents::Flux (  double *    Y, double *    DY )  [private]

Definition at line 235 of file Components.cpp. References CA1, CA2, DY6S, DY8S, DY9, CGeometry::E23, E3Rate, CCell::GetDisplay, CCell::GetDNA, CCell::GetGeometry, CGeometry::GetSurface, CGeometry::GetVolume, KR, m_pCell, CDNA::MidBound, CDNA::NORG, CDNA::NTOT, CDNA::OddGD, CDisplay::WarningMessage, and Y. Referenced by FirstInt, Integrate, and PredictorCorrector.

double CComponents::GetDY6S (    )

Definition at line 433 of file Components.cpp. References DY6S. Referenced by CDNA::EcoInit.

double CComponents::GetDY8S (    )

Definition at line 438 of file Components.cpp. References DY8S. Referenced by CDNA::AdvanceFork.

double CComponents::GetDY9 (    )

Definition at line 443 of file Components.cpp. References DY9. Referenced by CGeometry::UpdateShape.

double CComponents::GetY (  int    i )

Definition at line 139 of file Components.cpp. References Y. Referenced by CGeometry::AddSepta, CGeometry::ComputeVolume, CDNA::EcoInit, CDisplay::PrintComponents, and CGeometry::UpdateShape.

void CComponents::Initialize (    )

Definition at line 79 of file Components.cpp. References CA1, CA2, CA3, DEV, DT, DY6S, DY8S, DY9, E3Rate, InitialValues, ITN, KR, NBIOVARS, NT2, Y, Y0, Y1, Y2, and Y2EST. Referenced by CComponents.

void CComponents::Integrate (    )

Definition at line 57 of file Components.cpp. References CCell::AdvanceTime, Averages, CheckNegConc, CGeometry::ComputeVolume, DecideStepSize, DT, FirstInt, Flux, CCell::GetGeometry, m_pCell, NBIOVARS, NT2, PredictorCorrector, TruncatedError, Y, and Y2. Referenced by PredictorCorrector.

void CComponents::NextY (    )

Definition at line 461 of file Components.cpp. References NBIOVARS, Y0, Y1, and Y2. Referenced by CCell::DivisionCheck.

CComponents & CComponents::operator= (  const CComponents &    rhs )

Definition at line 36 of file Components.cpp.

void CComponents::PredictorCorrector (    )  [private]

Definition at line 158 of file Components.cpp. References DEV, DT, Flux, Integrate, ITN, NBIOVARS, NT2, Y0, Y1, Y2, and Y2EST. Referenced by Integrate.

void CComponents::ResetY (  int    i )

Definition at line 448 of file Components.cpp. References Y, Y1, and Y2. Referenced by CGeometry::AddSepta.

void CComponents::StartAverages (    )

Definition at line 132 of file Components.cpp. References Averages, NBIOVARS, and TotalTime. Referenced by CCell::Run.

void CComponents::TruncatedError (    )  [private]

Definition at line 213 of file Components.cpp. References NBIOVARS, Y, Y2, and Y2EST. Referenced by Integrate.

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Member Data Documentation

double CComponents::Averages[NBIOVARS] [private]

Definition at line 51 of file Components.h. Referenced by Integrate, and StartAverages.

double CComponents::CA1 [private]

Definition at line 64 of file Components.h. Referenced by Flux, and Initialize.

double CComponents::CA2 [private]

Definition at line 65 of file Components.h. Referenced by Flux, and Initialize.

double CComponents::CA3 [private]

Definition at line 66 of file Components.h. Referenced by Initialize.

double CComponents::DEV

Definition at line 38 of file Components.h. Referenced by Initialize, and PredictorCorrector.

double CComponents::DT

Definition at line 37 of file Components.h. Referenced by CDNA::AdvanceFork, DecideStepSize, CDNA::EcoInit, FirstInt, Initialize, Integrate, PredictorCorrector, and CGeometry::UpdateShape.

double CComponents::DY6S [private]

Definition at line 61 of file Components.h. Referenced by Flux, GetDY6S, and Initialize.

double CComponents::DY8S [private]

Definition at line 62 of file Components.h. Referenced by Flux, GetDY8S, and Initialize.

double CComponents::DY9 [private]

Definition at line 63 of file Components.h. Referenced by Flux, GetDY9, and Initialize.

double CComponents::E3Rate [private]

Definition at line 57 of file Components.h. Referenced by Flux, and Initialize.

double CComponents::InitialValues[NBIOVARS] [private]

Definition at line 50 of file Components.h. Referenced by Initialize.

int CComponents::ITN [private]

Definition at line 40 of file Components.h. Referenced by DecideStepSize, Initialize, and PredictorCorrector.

double CComponents::KR[27] [private]

Definition at line 52 of file Components.h. Referenced by Flux, and Initialize.

CCell* CComponents::m_pCell [private]

Definition at line 48 of file Components.h. Referenced by CComponents, CheckNegConc, Flux, and Integrate.

int CComponents::NDimensions [private]

Definition at line 49 of file Components.h.

int CComponents::NT2 [private]

Definition at line 41 of file Components.h. Referenced by DecideStepSize, FirstInt, Initialize, Integrate, and PredictorCorrector.

int CComponents::test

Definition at line 32 of file Components.h. Referenced by CComponents.

double CComponents::TotalTime [private]

Definition at line 59 of file Components.h. Referenced by StartAverages.

double CComponents::Y[NBIOVARS] [private]

Definition at line 60 of file Components.h. Referenced by CheckNegConc, Divide, Flux, GetY, Initialize, Integrate, ResetY, and TruncatedError.

double CComponents::Y0[NBIOVARS] [private]

Definition at line 53 of file Components.h. Referenced by Divide, FirstInt, Initialize, NextY, and PredictorCorrector.

double CComponents::Y1[NBIOVARS] [private]

Definition at line 54 of file Components.h. Referenced by FirstInt, Initialize, NextY, PredictorCorrector, and ResetY.

double CComponents::Y2[NBIOVARS] [private]

Definition at line 55 of file Components.h. Referenced by Initialize, Integrate, NextY, PredictorCorrector, ResetY, and TruncatedError.

double CComponents::Y2EST[NBIOVARS] [private]

Definition at line 56 of file Components.h. Referenced by Initialize, PredictorCorrector, and TruncatedError.

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The documentation for this class was generated from the following files:

• Components.h
• Components.cpp

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