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ChemicalTimeSeriesData Class Reference

#include <ChemicalTimeSeriesData.h>

Inheritance diagram for ChemicalTimeSeriesData:

[legend]Collaboration diagram for ChemicalTimeSeriesData:

[legend]List of all members.

Public Methods
	ChemicalTimeSeriesData (ReactionNetwork *reactionNetwork, std::string fileName)
	ChemicalTimeSeriesData (ReactionNetwork *reactionNetwork)
virtual	~ChemicalTimeSeriesData ()
std::vector< DataPoint * >	GetTimeSeries (int chemIndex)
std::vector< TimeVectorPoint * >	GetTimeVector ()
void	AttachNewTimeSeries (ReactionNetwork *reactionNetwork, std::string fileName)
void	SortChemTimeSeriesData ()
void	SortTimeVector ()
void	TimeVectorSynchronize ()
double	GetNextDataTime (double time)
double	GetLatestDataTime ()
int	GetNDataPoints ()
int	GetNTimeSeries ()
int	GetNChemicals ()
Private Attributes
int	nChem
int	nTimeSeries
std::string	m_sUnits
std::vector< TimeVectorPoint * >	timeVector
vvpDataPoint	chemData

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Constructor & Destructor Documentation

ChemicalTimeSeriesData::ChemicalTimeSeriesData (  ReactionNetwork *    reactionNetwork, std::string    fileName )

Definition at line 38 of file ChemicalTimeSeriesData.cpp. References chemData, DataPoint::DataPoint, ReactionNetwork::GetChemical, Chemical::GetName, ReactionNetwork::GetNumberOfChemicals, nChem, nTimeSeries, SortChemTimeSeriesData, and TimeVectorSynchronize.

ChemicalTimeSeriesData::ChemicalTimeSeriesData (  ReactionNetwork *    reactionNetwork )

Definition at line 15 of file ChemicalTimeSeriesData.cpp. References chemData, ReactionNetwork::GetNumberOfChemicals, and nChem.

ChemicalTimeSeriesData::~ChemicalTimeSeriesData (    )  [virtual]

Definition at line 186 of file ChemicalTimeSeriesData.cpp. References chemData, nChem, and timeVector.

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Member Function Documentation

void ChemicalTimeSeriesData::AttachNewTimeSeries (  ReactionNetwork *    reactionNetwork, std::string    fileName )

Definition at line 109 of file ChemicalTimeSeriesData.cpp. References chemData, DataPoint::DataPoint, ReactionNetwork::GetChemical, Chemical::GetName, ReactionNetwork::GetNumberOfChemicals, nChem, nTimeSeries, SortChemTimeSeriesData, and TimeVectorSynchronize. Referenced by Experiment::ReadData.

double ChemicalTimeSeriesData::GetLatestDataTime (    )

Definition at line 280 of file ChemicalTimeSeriesData.cpp. References SortTimeVector, and timeVector. Referenced by SingleNetworkMinimizable::ComputeResiduals, and SingleNetworkMinimizable::Initialize.

int ChemicalTimeSeriesData::GetNChemicals (    )

Definition at line 238 of file ChemicalTimeSeriesData.cpp. References nChem. Referenced by GnuPlotterTimeSeriesSharedBFactorObserver::Update, GnuPlotterTimeSeriesObserver::Update, and GnuPlotterEnsembleDataDirectorObserver::Update.

int ChemicalTimeSeriesData::GetNDataPoints (    )

Definition at line 228 of file ChemicalTimeSeriesData.cpp. References timeVector. Referenced by SingleNetworkMinimizable::Initialize.

double ChemicalTimeSeriesData::GetNextDataTime (  double    time )

Definition at line 243 of file ChemicalTimeSeriesData.cpp. References timeVector.

int ChemicalTimeSeriesData::GetNTimeSeries (    )

Definition at line 233 of file ChemicalTimeSeriesData.cpp. References nTimeSeries. Referenced by GnuPlotterTimeSeriesSharedBFactorObserver::Update, GnuPlotterTimeSeriesObserver::Update, and GnuPlotterEnsembleDataDirectorObserver::Update.

std::vector< DataPoint * > ChemicalTimeSeriesData::GetTimeSeries (  int    chemIndex )

Definition at line 203 of file ChemicalTimeSeriesData.cpp. References chemData. Referenced by SingleNetworkMinimizable::ComputeResiduals, SingleNetworkMinimizable::Initialize, GnuPlotterTimeSeriesSharedBFactorObserver::Update, GnuPlotterTimeSeriesObserver::Update, and GnuPlotterEnsembleDataDirectorObserver::Update.

std::vector<TimeVectorPoint *> ChemicalTimeSeriesData::GetTimeVector (    )  [inline]

Definition at line 36 of file ChemicalTimeSeriesData.h. References timeVector. Referenced by SingleNetworkMinimizable::ComputeResiduals.

void ChemicalTimeSeriesData::SortChemTimeSeriesData (    )

Definition at line 208 of file ChemicalTimeSeriesData.cpp. References chemData, and nChem. Referenced by AttachNewTimeSeries, and ChemicalTimeSeriesData.

void ChemicalTimeSeriesData::SortTimeVector (    )

Definition at line 221 of file ChemicalTimeSeriesData.cpp. References timeVector. Referenced by GetLatestDataTime, and TimeVectorSynchronize.

void ChemicalTimeSeriesData::TimeVectorSynchronize (    )

Definition at line 164 of file ChemicalTimeSeriesData.cpp. References chemData, nChem, SortTimeVector, and timeVector. Referenced by AttachNewTimeSeries, and ChemicalTimeSeriesData.

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Member Data Documentation

vvpDataPoint ChemicalTimeSeriesData::chemData [private]

Definition at line 56 of file ChemicalTimeSeriesData.h. Referenced by AttachNewTimeSeries, ChemicalTimeSeriesData, GetTimeSeries, SortChemTimeSeriesData, TimeVectorSynchronize, and ~ChemicalTimeSeriesData.

std::string ChemicalTimeSeriesData::m_sUnits [private]

Definition at line 54 of file ChemicalTimeSeriesData.h.

int ChemicalTimeSeriesData::nChem [private]

Definition at line 50 of file ChemicalTimeSeriesData.h. Referenced by AttachNewTimeSeries, ChemicalTimeSeriesData, GetNChemicals, SortChemTimeSeriesData, TimeVectorSynchronize, and ~ChemicalTimeSeriesData.

int ChemicalTimeSeriesData::nTimeSeries [private]

Definition at line 51 of file ChemicalTimeSeriesData.h. Referenced by AttachNewTimeSeries, ChemicalTimeSeriesData, and GetNTimeSeries.

std::vector<TimeVectorPoint *> ChemicalTimeSeriesData::timeVector [private]

Definition at line 55 of file ChemicalTimeSeriesData.h. Referenced by GetLatestDataTime, GetNDataPoints, GetNextDataTime, GetTimeVector, SortTimeVector, TimeVectorSynchronize, and ~ChemicalTimeSeriesData.

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The documentation for this class was generated from the following files:

• ChemicalTimeSeriesData.h
• ChemicalTimeSeriesData.cpp

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